Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm25043-201ENSMUST00000158604 212 ntBASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Gm37201-201ENSMUST00000191845 523 ntBASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gm11930-201ENSMUST00000117788 190 ntBASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gm8018-201ENSMUST00000173536 789 ntBASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sh3rf2Q8BZT2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Gm37466-201ENSMUST00000195692 652 ntBASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Gm44967-201ENSMUST00000207047 631 ntBASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Gm13097-201ENSMUST00000210722 397 ntBASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sh3rf2Q8BZT2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms