Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Snora78-201ENSMUST00000158630 128 ntBASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Gm4768-201ENSMUST00000206199 686 ntBASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Sfr1Q8BP27 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.06□□□□□ -0.32
Sfr1Q8BP27 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Gm7029-201ENSMUST00000173226 450 ntBASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Gm37042-201ENSMUST00000193816 581 ntBASIC13.06□□□□□ -0.32
Sfr1Q8BP27 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Gm19163-201ENSMUST00000223313 780 ntBASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sfr1Q8BP27 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Gm17208-201ENSMUST00000168388 535 ntBASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 AY702102-202ENSMUST00000194651 1173 ntBASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sfr1Q8BP27 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sfr1Q8BP27 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms