Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40bQ80W14 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40bQ80W14 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gm11628-201ENSMUST00000117568 171 ntBASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gm26185-201ENSMUST00000157692 266 ntBASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40bQ80W14 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Gm15276-201ENSMUST00000145953 498 ntBASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Gm25732-201ENSMUST00000175168 60 ntBASIC14.76□□□□□ -0.05
Prpf40bQ80W14 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Gm4768-201ENSMUST00000206199 686 ntBASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Prpf40bQ80W14 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms