Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm15770-201ENSMUST00000117498 584 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm7211-201ENSMUST00000172692 1118 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm11942-201ENSMUST00000180255 345 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm18801-201ENSMUST00000186616 536 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm19187-201ENSMUST00000206781 892 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 CT010478.1-201ENSMUST00000220747 2787 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm26368-201ENSMUST00000157826 118 ntBASIC10.78□□□□□ -0.68
Rif1Q6PR54 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rif1Q6PR54 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Rif1Q6PR54 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Gm12516-201ENSMUST00000120819 385 ntBASIC10.77□□□□□ -0.68
Rif1Q6PR54 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Gm25881-201ENSMUST00000157783 103 ntBASIC10.77□□□□□ -0.68
Rif1Q6PR54 Gm5733-201ENSMUST00000190232 939 ntBASIC10.77□□□□□ -0.68
Rif1Q6PR54 Gm7238-201ENSMUST00000206467 973 ntBASIC10.77□□□□□ -0.68
Rif1Q6PR54 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rif1Q6PR54 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms