Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Snrnp40Q6PE01 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Gm15131-201ENSMUST00000119124 595 ntBASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Gm39404-201ENSMUST00000216350 313 ntBASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Snrnp40Q6PE01 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Gm15711-201ENSMUST00000118889 535 ntBASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Gm12380-201ENSMUST00000119012 544 ntBASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Gm10076-201ENSMUST00000073238 384 ntBASIC11.21□□□□□ -0.61
Snrnp40Q6PE01 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Snrnp40Q6PE01 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Snrnp40Q6PE01 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Snrnp40Q6PE01 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Snrnp40Q6PE01 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Snrnp40Q6PE01 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.21□□□□□ -0.62
Snrnp40Q6PE01 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm23949-201ENSMUST00000104027 127 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm13315-201ENSMUST00000120376 991 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm28071-201ENSMUST00000190355 478 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 AY036118-201ENSMUST00000200021 923 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 Gm44545-201ENSMUST00000208262 746 ntBASIC11.2□□□□□ -0.62
Snrnp40Q6PE01 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms