Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShbQ6PD21 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ShbQ6PD21 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ShbQ6PD21 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShbQ6PD21 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ShbQ6PD21 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShbQ6PD21 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShbQ6PD21 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.63□□□□□ -0.23
ShbQ6PD21 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ShbQ6PD21 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ShbQ6PD21 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ShbQ6PD21 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
ShbQ6PD21 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ShbQ6PD21 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Gm9111-201ENSMUST00000219394 709 ntBASIC13.62□□□□□ -0.23
ShbQ6PD21 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.62□□□□□ -0.23
ShbQ6PD21 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ShbQ6PD21 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.62□□□□□ -0.23
ShbQ6PD21 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ShbQ6PD21 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ShbQ6PD21 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShbQ6PD21 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm12990-201ENSMUST00000120372 468 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Mir6923-201ENSMUST00000184592 72 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm5621-201ENSMUST00000187303 640 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm28686-201ENSMUST00000187404 609 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm2875-201ENSMUST00000211333 360 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.61□□□□□ -0.23
ShbQ6PD21 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.61□□□□□ -0.23
ShbQ6PD21 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
ShbQ6PD21 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShbQ6PD21 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.61□□□□□ -0.23
ShbQ6PD21 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShbQ6PD21 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ShbQ6PD21 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms