Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Gm16215-201ENSMUST00000161990 637 ntBASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Gm42612-201ENSMUST00000197986 623 ntBASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Gm43170-201ENSMUST00000199827 612 ntBASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Gm18307-201ENSMUST00000206864 949 ntBASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Tpm4Q6IRU2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm4Q6IRU2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm4Q6IRU2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms