Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smarca2Q6DIC0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Gm11956-201ENSMUST00000119525 512 ntBASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Gm4310-201ENSMUST00000177847 889 ntBASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Gm45575-201ENSMUST00000210283 548 ntBASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Arhgef33-207ENSMUST00000224966 490 ntBASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smarca2Q6DIC0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Gm13182-201ENSMUST00000122241 312 ntBASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Gm43692-201ENSMUST00000198236 1062 ntBASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Gm19009-201ENSMUST00000223072 823 ntBASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 Gm10676-201ENSMUST00000098778 3221 ntBASIC21.8■■□□□ 1.08
Smarca2Q6DIC0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 n-R5s64-201ENSMUST00000102019 119 ntBASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Gm14219-201ENSMUST00000120414 288 ntBASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Gm17931-201ENSMUST00000208132 634 ntBASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 AC166344.1-201ENSMUST00000223745 674 ntBASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Smarca2Q6DIC0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm5621-201ENSMUST00000187303 640 ntBASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm5100-201ENSMUST00000195631 589 ntBASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm19640-201ENSMUST00000214849 464 ntBASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm6430-201ENSMUST00000054664 1248 ntBASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm43267-201ENSMUST00000199664 1796 ntBASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm19863-201ENSMUST00000192480 2218 ntBASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm11949-201ENSMUST00000117640 372 ntBASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC21.78■■□□□ 1.08
Smarca2Q6DIC0 Gm8815-201ENSMUST00000173809 620 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms