Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm24398-201ENSMUST00000157870 109 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.28□□□□□ -0.44
Col12a1Q60847 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm5805-201ENSMUST00000072779 456 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col12a1Q60847 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm24791-201ENSMUST00000104284 131 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.28□□□□□ -0.44
Col12a1Q60847 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col12a1Q60847 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col12a1Q60847 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Col12a1Q60847 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.27□□□□□ -0.44
Col12a1Q60847 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.27□□□□□ -0.44
Col12a1Q60847 Gm11578-201ENSMUST00000118530 459 ntBASIC12.27□□□□□ -0.44
Col12a1Q60847 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.27□□□□□ -0.44
Col12a1Q60847 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Gm7904-201ENSMUST00000217049 465 ntBASIC12.27□□□□□ -0.44
Col12a1Q60847 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.27□□□□□ -0.44
Col12a1Q60847 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Col12a1Q60847 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Col12a1Q60847 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col12a1Q60847 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.27□□□□□ -0.45
Col12a1Q60847 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.27□□□□□ -0.45
Col12a1Q60847 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Col12a1Q60847 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Col12a1Q60847 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col12a1Q60847 Gm19587-201ENSMUST00000191395 545 ntBASIC12.27□□□□□ -0.45
Col12a1Q60847 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.27□□□□□ -0.45
Col12a1Q60847 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col12a1Q60847 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col12a1Q60847 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col12a1Q60847 Gm12164-201ENSMUST00000121695 551 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm13286-201ENSMUST00000117750 537 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Gm22442-201ENSMUST00000157256 144 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Trav11n-201ENSMUST00000200113 343 ntBASIC12.26□□□□□ -0.45
Col12a1Q60847 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col12a1Q60847 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col12a1Q60847 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms