Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Tmem40Q4FJU9 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Tmem40Q4FJU9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Gm17376-201ENSMUST00000166016 84 ntBASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Gm6082-201ENSMUST00000215204 454 ntBASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Gm9877-201ENSMUST00000064271 2627 ntBASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Tmem40Q4FJU9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm22323-201ENSMUST00000103832 109 ntBASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm8805-201ENSMUST00000117848 313 ntBASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm13297-201ENSMUST00000120205 934 ntBASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm2231-201ENSMUST00000125661 612 ntBASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm38158-201ENSMUST00000194617 339 ntBASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Gm3786-201ENSMUST00000202659 378 ntBASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tmem40Q4FJU9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms