Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Gm37028-201ENSMUST00000194276 107 ntBASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gm25881-201ENSMUST00000157783 103 ntBASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gm6905-201ENSMUST00000205729 511 ntBASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fam196aQ3USH1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Mir1901-201ENSMUST00000122616 78 ntBASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.8□□□□□ -0.36
Fam196aQ3USH1 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms