Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SgcbP82349 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcbP82349 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SgcbP82349 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcbP82349 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcbP82349 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SgcbP82349 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.42□□□□□ -0.58
SgcbP82349 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcbP82349 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SgcbP82349 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcbP82349 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SgcbP82349 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
SgcbP82349 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.41□□□□□ -0.58
SgcbP82349 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.41□□□□□ -0.58
SgcbP82349 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.41□□□□□ -0.58
SgcbP82349 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.41□□□□□ -0.58
SgcbP82349 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.41□□□□□ -0.58
SgcbP82349 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.41□□□□□ -0.58
SgcbP82349 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC11.41□□□□□ -0.58
SgcbP82349 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.41□□□□□ -0.58
SgcbP82349 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SgcbP82349 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.41□□□□□ -0.58
SgcbP82349 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.41□□□□□ -0.58
SgcbP82349 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
SgcbP82349 Gm9899-201ENSMUST00000065519 555 ntBASIC11.41□□□□□ -0.58
SgcbP82349 Snora73a-201ENSMUST00000082453 205 ntBASIC11.41□□□□□ -0.58
SgcbP82349 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SgcbP82349 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.41□□□□□ -0.58
SgcbP82349 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SgcbP82349 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SgcbP82349 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SgcbP82349 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SgcbP82349 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SgcbP82349 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.4□□□□□ -0.58
SgcbP82349 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.4□□□□□ -0.58
SgcbP82349 Gm43630-201ENSMUST00000201550 776 ntBASIC11.4□□□□□ -0.58
SgcbP82349 Gm18584-201ENSMUST00000203098 964 ntBASIC11.4□□□□□ -0.58
SgcbP82349 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.4□□□□□ -0.58
SgcbP82349 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.4□□□□□ -0.58
SgcbP82349 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.4□□□□□ -0.58
SgcbP82349 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SgcbP82349 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SgcbP82349 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
SgcbP82349 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.4□□□□□ -0.58
SgcbP82349 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SgcbP82349 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms