Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm11978-201ENSMUST00000122315 466 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm2231-201ENSMUST00000125661 612 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm4271-201ENSMUST00000174444 973 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm28693-202ENSMUST00000190758 331 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm43818-201ENSMUST00000200605 466 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.67□□□□□ -0.7
Pdlim4P70271 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm10146-201ENSMUST00000072739 309 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.67□□□□□ -0.7
Pdlim4P70271 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdlim4P70271 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdlim4P70271 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.66□□□□□ -0.7
Pdlim4P70271 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.66□□□□□ -0.7
Pdlim4P70271 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Gm14127-201ENSMUST00000117906 678 ntBASIC10.66□□□□□ -0.7
Pdlim4P70271 Gm26185-201ENSMUST00000157692 266 ntBASIC10.66□□□□□ -0.7
Pdlim4P70271 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Gm40466-201ENSMUST00000212174 422 ntBASIC10.66□□□□□ -0.7
Pdlim4P70271 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.66□□□□□ -0.7
Pdlim4P70271 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pdlim4P70271 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdlim4P70271 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms