Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Abcd3P55096 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.45□□□□□ -0.58
Abcd3P55096 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Abcd3P55096 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.45□□□□□ -0.58
Abcd3P55096 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Abcd3P55096 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Abcd3P55096 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.44□□□□□ -0.58
Abcd3P55096 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Abcd3P55096 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Gm4271-201ENSMUST00000174444 973 ntBASIC11.44□□□□□ -0.58
Abcd3P55096 Gm23363-201ENSMUST00000175024 79 ntBASIC11.44□□□□□ -0.58
Abcd3P55096 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.44□□□□□ -0.58
Abcd3P55096 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Abcd3P55096 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Abcd3P55096 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.44□□□□□ -0.58
Abcd3P55096 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Abcd3P55096 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Abcd3P55096 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.43□□□□□ -0.58
Abcd3P55096 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Abcd3P55096 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.43□□□□□ -0.58
Abcd3P55096 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Abcd3P55096 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Snord83b-201ENSMUST00000104546 94 ntBASIC11.43□□□□□ -0.58
Abcd3P55096 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.43□□□□□ -0.58
Abcd3P55096 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.43□□□□□ -0.58
Abcd3P55096 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.43□□□□□ -0.58
Abcd3P55096 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.43□□□□□ -0.58
Abcd3P55096 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Abcd3P55096 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.43□□□□□ -0.58
Abcd3P55096 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Abcd3P55096 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Abcd3P55096 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.43□□□□□ -0.58
Abcd3P55096 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.43□□□□□ -0.58
Abcd3P55096 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Abcd3P55096 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abcd3P55096 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Abcd3P55096 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.42□□□□□ -0.58
Abcd3P55096 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms