Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atxn1P54254 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.71□□□□□ -0.37
Atxn1P54254 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atxn1P54254 Gm27046-201ENSMUST00000182160 463 ntBASIC12.71□□□□□ -0.37
Atxn1P54254 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.71□□□□□ -0.37
Atxn1P54254 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Gm44126-201ENSMUST00000204831 514 ntBASIC12.71□□□□□ -0.37
Atxn1P54254 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.71□□□□□ -0.37
Atxn1P54254 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.71□□□□□ -0.37
Atxn1P54254 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Atxn1P54254 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atxn1P54254 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.71□□□□□ -0.38
Atxn1P54254 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Atxn1P54254 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atxn1P54254 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Atxn1P54254 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.7□□□□□ -0.38
Atxn1P54254 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.7□□□□□ -0.38
Atxn1P54254 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Atxn1P54254 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atxn1P54254 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.7□□□□□ -0.38
Atxn1P54254 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Atxn1P54254 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.7□□□□□ -0.38
Atxn1P54254 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atxn1P54254 Gm6407-201ENSMUST00000176468 549 ntBASIC12.7□□□□□ -0.38
Atxn1P54254 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
Atxn1P54254 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.7□□□□□ -0.38
Atxn1P54254 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Atxn1P54254 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.7□□□□□ -0.38
Atxn1P54254 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atxn1P54254 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Atxn1P54254 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
Atxn1P54254 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Atxn1P54254 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.7□□□□□ -0.38
Atxn1P54254 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Atxn1P54254 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atxn1P54254 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.69□□□□□ -0.38
Atxn1P54254 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Atxn1P54254 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atxn1P54254 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms