Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.96□□□□□ -0.49
Sox2P48432 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.96□□□□□ -0.49
Sox2P48432 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox2P48432 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.96□□□□□ -0.49
Sox2P48432 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sox2P48432 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Sox2P48432 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Gm15487-201ENSMUST00000122373 465 ntBASIC11.96□□□□□ -0.49
Sox2P48432 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.96□□□□□ -0.49
Sox2P48432 Gm29667-201ENSMUST00000190817 490 ntBASIC11.96□□□□□ -0.49
Sox2P48432 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Gm44124-201ENSMUST00000204159 472 ntBASIC11.96□□□□□ -0.49
Sox2P48432 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.96□□□□□ -0.49
Sox2P48432 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.96□□□□□ -0.49
Sox2P48432 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sox2P48432 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Sox2P48432 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Sox2P48432 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Sox2P48432 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sox2P48432 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox2P48432 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox2P48432 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox2P48432 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox2P48432 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox2P48432 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Mir686-201ENSMUST00000102174 109 ntBASIC11.95□□□□□ -0.5
Sox2P48432 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox2P48432 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox2P48432 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox2P48432 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.95□□□□□ -0.5
Sox2P48432 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Sox2P48432 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.95□□□□□ -0.5
Sox2P48432 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.95□□□□□ -0.5
Sox2P48432 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox2P48432 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox2P48432 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox2P48432 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox2P48432 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Sox2P48432 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox2P48432 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox2P48432 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms