Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Thbs1P35441 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Thbs1P35441 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.86□□□□□ -0.51
Thbs1P35441 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Thbs1P35441 Gm8805-201ENSMUST00000117848 313 ntBASIC11.86□□□□□ -0.51
Thbs1P35441 Gm8810-201ENSMUST00000172895 754 ntBASIC11.86□□□□□ -0.51
Thbs1P35441 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Gm6244-201ENSMUST00000178732 841 ntBASIC11.86□□□□□ -0.51
Thbs1P35441 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Thbs1P35441 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.86□□□□□ -0.51
Thbs1P35441 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Thbs1P35441 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.86□□□□□ -0.51
Thbs1P35441 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.86□□□□□ -0.51
Thbs1P35441 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.86□□□□□ -0.51
Thbs1P35441 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Thbs1P35441 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Thbs1P35441 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Thbs1P35441 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Gm12203-201ENSMUST00000118235 598 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Gm11814-201ENSMUST00000119515 929 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Gm15824-201ENSMUST00000119516 955 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Gm12209-201ENSMUST00000120089 596 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Gm14704-201ENSMUST00000120300 874 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Gm16479-201ENSMUST00000121706 932 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Thbs1P35441 Gm22121-201ENSMUST00000175148 54 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.85□□□□□ -0.51
Thbs1P35441 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.85□□□□□ -0.51
Thbs1P35441 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.85□□□□□ -0.51
Thbs1P35441 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Thbs1P35441 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Thbs1P35441 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms