Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gjb1P28230 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.22□□□□□ -0.13
Gjb1P28230 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gjb1P28230 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gjb1P28230 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Gm14999-201ENSMUST00000121039 624 ntBASIC14.21□□□□□ -0.13
Gjb1P28230 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.21□□□□□ -0.13
Gjb1P28230 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.21□□□□□ -0.13
Gjb1P28230 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.21□□□□□ -0.13
Gjb1P28230 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.21□□□□□ -0.13
Gjb1P28230 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gjb1P28230 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Gjb1P28230 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gjb1P28230 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gjb1P28230 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Gjb1P28230 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.2□□□□□ -0.14
Gjb1P28230 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.2□□□□□ -0.14
Gjb1P28230 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Gjb1P28230 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 Gm37905-201ENSMUST00000195310 341 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Gjb1P28230 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.2□□□□□ -0.14
Gjb1P28230 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 Gm1821-202ENSMUST00000227415 750 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Gm10076-201ENSMUST00000073238 384 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gjb1P28230 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Gjb1P28230 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.2□□□□□ -0.14
Gjb1P28230 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gjb1P28230 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gjb1P28230 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.19□□□□□ -0.14
Gjb1P28230 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Gjb1P28230 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Gjb1P28230 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.19□□□□□ -0.14
Gjb1P28230 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Gm8018-201ENSMUST00000173536 789 ntBASIC14.19□□□□□ -0.14
Gjb1P28230 Gm28882-201ENSMUST00000185504 314 ntBASIC14.19□□□□□ -0.14
Gjb1P28230 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.19□□□□□ -0.14
Gjb1P28230 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.19□□□□□ -0.14
Gjb1P28230 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.19□□□□□ -0.14
Gjb1P28230 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.19□□□□□ -0.14
Gjb1P28230 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gjb1P28230 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.19□□□□□ -0.14
Gjb1P28230 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms