Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Ccl6P27784 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccl6P27784 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.96□□□□□ -0.82
Ccl6P27784 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.96□□□□□ -0.82
Ccl6P27784 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccl6P27784 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Ccl6P27784 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Ccl6P27784 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.96□□□□□ -0.82
Ccl6P27784 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Ccl6P27784 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Ccl6P27784 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl6P27784 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Ccl6P27784 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.95□□□□□ -0.82
Ccl6P27784 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.95□□□□□ -0.82
Ccl6P27784 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl6P27784 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl6P27784 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Gm12203-201ENSMUST00000118235 598 ntBASIC9.95□□□□□ -0.82
Ccl6P27784 Gm12209-201ENSMUST00000120089 596 ntBASIC9.95□□□□□ -0.82
Ccl6P27784 Gm13123-201ENSMUST00000122173 492 ntBASIC9.95□□□□□ -0.82
Ccl6P27784 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9.95□□□□□ -0.82
Ccl6P27784 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.95□□□□□ -0.82
Ccl6P27784 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Gm5035-201ENSMUST00000215581 927 ntBASIC9.95□□□□□ -0.82
Ccl6P27784 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl6P27784 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl6P27784 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccl6P27784 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccl6P27784 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Ccl6P27784 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ccl6P27784 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl6P27784 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ccl6P27784 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Ccl6P27784 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC9.94□□□□□ -0.82
Ccl6P27784 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ccl6P27784 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.94□□□□□ -0.82
Ccl6P27784 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ccl6P27784 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ccl6P27784 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Ccl6P27784 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.94□□□□□ -0.82
Ccl6P27784 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Ccl6P27784 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Ccl6P27784 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 256.2 ms