Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.39■□□□□ 0.05
Col4a1P02463 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.39■□□□□ 0.05
Col4a1P02463 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Col4a1P02463 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.39■□□□□ 0.05
Col4a1P02463 Gm10752-201ENSMUST00000218348 729 ntBASIC15.39■□□□□ 0.05
Col4a1P02463 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.39■□□□□ 0.05
Col4a1P02463 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.39■□□□□ 0.05
Col4a1P02463 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.39■□□□□ 0.05
Col4a1P02463 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col4a1P02463 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Col4a1P02463 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.39■□□□□ 0.05
Col4a1P02463 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.39■□□□□ 0.05
Col4a1P02463 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col4a1P02463 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Col4a1P02463 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Col4a1P02463 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.38■□□□□ 0.05
Col4a1P02463 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Col4a1P02463 Gm3332-201ENSMUST00000189337 928 ntBASIC15.38■□□□□ 0.05
Col4a1P02463 Gm807-202ENSMUST00000224929 408 ntBASIC15.38■□□□□ 0.05
Col4a1P02463 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.38■□□□□ 0.05
Col4a1P02463 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.38■□□□□ 0.05
Col4a1P02463 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.38■□□□□ 0.05
Col4a1P02463 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.38■□□□□ 0.05
Col4a1P02463 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.38■□□□□ 0.05
Col4a1P02463 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Col4a1P02463 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Gm27438-201ENSMUST00000183480 110 ntBASIC15.38■□□□□ 0.05
Col4a1P02463 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.38■□□□□ 0.05
Col4a1P02463 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.38■□□□□ 0.05
Col4a1P02463 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Col4a1P02463 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Col4a1P02463 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.38■□□□□ 0.05
Col4a1P02463 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col4a1P02463 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.37■□□□□ 0.05
Col4a1P02463 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.37■□□□□ 0.05
Col4a1P02463 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.37■□□□□ 0.05
Col4a1P02463 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.37■□□□□ 0.05
Col4a1P02463 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.37■□□□□ 0.05
Col4a1P02463 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 Gm3508-201ENSMUST00000186012 792 ntBASIC15.37■□□□□ 0.05
Col4a1P02463 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC15.37■□□□□ 0.05
Col4a1P02463 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Gm4482-201ENSMUST00000200876 742 ntBASIC15.37■□□□□ 0.05
Col4a1P02463 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col4a1P02463 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Col4a1P02463 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col4a1P02463 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms