Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.26□□□□□ -0.45
Hcn1O88704 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Gm14127-201ENSMUST00000117906 678 ntBASIC12.26□□□□□ -0.45
Hcn1O88704 Gm8213-201ENSMUST00000118191 441 ntBASIC12.26□□□□□ -0.45
Hcn1O88704 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.26□□□□□ -0.45
Hcn1O88704 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.26□□□□□ -0.45
Hcn1O88704 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.26□□□□□ -0.45
Hcn1O88704 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.26□□□□□ -0.45
Hcn1O88704 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.26□□□□□ -0.45
Hcn1O88704 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hcn1O88704 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.26□□□□□ -0.45
Hcn1O88704 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Gm6091-201ENSMUST00000098307 165 ntBASIC12.26□□□□□ -0.45
Hcn1O88704 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.26□□□□□ -0.45
Hcn1O88704 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hcn1O88704 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.26□□□□□ -0.45
Hcn1O88704 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hcn1O88704 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.25□□□□□ -0.45
Hcn1O88704 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 Gm10156-201ENSMUST00000122364 462 ntBASIC12.25□□□□□ -0.45
Hcn1O88704 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.25□□□□□ -0.45
Hcn1O88704 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Gm8810-201ENSMUST00000172895 754 ntBASIC12.25□□□□□ -0.45
Hcn1O88704 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.25□□□□□ -0.45
Hcn1O88704 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.25□□□□□ -0.45
Hcn1O88704 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hcn1O88704 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.25□□□□□ -0.45
Hcn1O88704 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hcn1O88704 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hcn1O88704 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.25□□□□□ -0.45
Hcn1O88704 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Hcn1O88704 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Gm14350-201ENSMUST00000116642 640 ntBASIC12.24□□□□□ -0.45
Hcn1O88704 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Gm6447-201ENSMUST00000118905 835 ntBASIC12.24□□□□□ -0.45
Hcn1O88704 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.24□□□□□ -0.45
Hcn1O88704 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hcn1O88704 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hcn1O88704 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms