Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Gm5863-201ENSMUST00000121760 1008 ntBASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Gm13182-201ENSMUST00000122241 312 ntBASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Gm6722-201ENSMUST00000221586 390 ntBASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Gm10288-201ENSMUST00000084614 537 ntBASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.54■□□□□ 0.4
Scaf11E9PZM7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scaf11E9PZM7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Gm11354-201ENSMUST00000121974 422 ntBASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Gm22877-201ENSMUST00000175451 105 ntBASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Gm4157-201ENSMUST00000211647 679 ntBASIC17.53■□□□□ 0.4
Scaf11E9PZM7 AC153954.1-201ENSMUST00000216959 255 ntBASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Scaf11E9PZM7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Mir6923-201ENSMUST00000184592 72 ntBASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scaf11E9PZM7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Scaf11E9PZM7 Gm5847-201ENSMUST00000178959 1595 ntBASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm11956-201ENSMUST00000119525 512 ntBASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm12990-201ENSMUST00000120372 468 ntBASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Gm42657-201ENSMUST00000201746 211 ntBASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scaf11E9PZM7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms