Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clip3B9EHT4 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.46□□□□□ -0.41
Clip3B9EHT4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Gm37497-201ENSMUST00000195830 798 ntBASIC12.46□□□□□ -0.41
Clip3B9EHT4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.46□□□□□ -0.41
Clip3B9EHT4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Gm10478-201ENSMUST00000084451 396 ntBASIC12.46□□□□□ -0.41
Clip3B9EHT4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Clip3B9EHT4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.46□□□□□ -0.42
Clip3B9EHT4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clip3B9EHT4 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.46□□□□□ -0.42
Clip3B9EHT4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.45□□□□□ -0.42
Clip3B9EHT4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gm13123-201ENSMUST00000122173 492 ntBASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gm6458-201ENSMUST00000211573 635 ntBASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.45□□□□□ -0.42
Clip3B9EHT4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clip3B9EHT4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms