Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trav3n-3A0A0G2JEM0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm27772-201ENSMUST00000184900 187 ntBASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm44335-201ENSMUST00000196879 141 ntBASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm44297-201ENSMUST00000198304 141 ntBASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm44346-201ENSMUST00000198851 141 ntBASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm8410-201ENSMUST00000117225 605 ntBASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm28630-201ENSMUST00000187806 498 ntBASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms