Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Snora78-201ENSMUST00000158630 128 ntBASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tubb3Q9ERD7 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Gm8213-201ENSMUST00000118191 441 ntBASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Gm8810-201ENSMUST00000172895 754 ntBASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Proscos-202ENSMUST00000178990 666 ntBASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tubb3Q9ERD7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Gm40466-201ENSMUST00000212174 422 ntBASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tubb3Q9ERD7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Tubb3Q9ERD7 Gm8062-201ENSMUST00000139696 444 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms