Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rita1Q9D1H0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rita1Q9D1H0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rita1Q9D1H0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rita1Q9D1H0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rita1Q9D1H0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.76□□□□□ -0.53
Rita1Q9D1H0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm13492-201ENSMUST00000119772 665 ntBASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm38266-201ENSMUST00000194931 421 ntBASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.75□□□□□ -0.53
Rita1Q9D1H0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.75□□□□□ -0.53
Rita1Q9D1H0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rita1Q9D1H0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rita1Q9D1H0 Gm25214-201ENSMUST00000104573 129 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms