Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrrc40Q9CRC8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lrrc40Q9CRC8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrrc40Q9CRC8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Gm23363-201ENSMUST00000175024 79 ntBASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Gm22121-201ENSMUST00000175148 54 ntBASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrrc40Q9CRC8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Gm15806-201ENSMUST00000120696 955 ntBASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Gm27486-201ENSMUST00000184923 80 ntBASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrrc40Q9CRC8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.71□□□□□ -0.38
Lrrc40Q9CRC8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Lrrc40Q9CRC8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms