Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldnd1Q9CQX5 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Gm14460-201ENSMUST00000121511 639 ntBASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldnd1Q9CQX5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Gm12501-201ENSMUST00000119163 529 ntBASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Gm11941-201ENSMUST00000119904 610 ntBASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Gm37246-201ENSMUST00000192665 835 ntBASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Gm21811-201ENSMUST00000096485 930 ntBASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cldnd1Q9CQX5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Cldnd1Q9CQX5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cldnd1Q9CQX5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cldnd1Q9CQX5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cldnd1Q9CQX5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cldnd1Q9CQX5 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cldnd1Q9CQX5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.02□□□□□ -0.32
Cldnd1Q9CQX5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cldnd1Q9CQX5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldnd1Q9CQX5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms