Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdh15Q99PJ1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Gm14760-201ENSMUST00000121831 999 ntBASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Mir6923-201ENSMUST00000184592 72 ntBASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.1□□□□□ -0.15
Pcdh15Q99PJ1 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Gm25201-201ENSMUST00000083093 170 ntBASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Gm14219-201ENSMUST00000120414 288 ntBASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Gm14247-201ENSMUST00000120950 237 ntBASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh15Q99PJ1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdh15Q99PJ1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.08□□□□□ -0.15
Pcdh15Q99PJ1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh15Q99PJ1 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.08□□□□□ -0.15
Pcdh15Q99PJ1 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.08□□□□□ -0.15
Pcdh15Q99PJ1 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh15Q99PJ1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh15Q99PJ1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh15Q99PJ1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh15Q99PJ1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh15Q99PJ1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms