Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm3283-201ENSMUST00000199319 1350 ntBASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col25a1Q99MQ5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Mir698-201ENSMUST00000102164 109 ntBASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Gm16202-201ENSMUST00000117532 544 ntBASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Gm15881-201ENSMUST00000148792 942 ntBASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Gm42511-201ENSMUST00000196160 234 ntBASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Gm5298-201ENSMUST00000201122 892 ntBASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col25a1Q99MQ5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Rprl1-202ENSMUST00000198476 238 ntBASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Gm45120-201ENSMUST00000208880 408 ntBASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Gm18204-201ENSMUST00000209835 793 ntBASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.25□□□□□ -0.29
Col25a1Q99MQ5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms