Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col20a1Q923P0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gm15703-201ENSMUST00000120250 880 ntBASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gm3096-201ENSMUST00000185770 364 ntBASIC15.09■□□□□ 0.01
Col20a1Q923P0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.09■□□□□ 0.01
Col20a1Q923P0 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.09■□□□□ 0.01
Col20a1Q923P0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.09■□□□□ 0.01
Col20a1Q923P0 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.09■□□□□ 0.01
Col20a1Q923P0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col20a1Q923P0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0.01
Col20a1Q923P0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col20a1Q923P0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col20a1Q923P0 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.08■□□□□ 0.01
Col20a1Q923P0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC15.08■□□□□ 0.01
Col20a1Q923P0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col20a1Q923P0 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.08■□□□□ 0
Col20a1Q923P0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Col20a1Q923P0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Gm14109-201ENSMUST00000118814 309 ntBASIC15.08■□□□□ 0
Col20a1Q923P0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.08■□□□□ 0
Col20a1Q923P0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.08■□□□□ 0
Col20a1Q923P0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Gm27046-201ENSMUST00000182160 463 ntBASIC15.08■□□□□ 0
Col20a1Q923P0 Gm8885-201ENSMUST00000189382 598 ntBASIC15.08■□□□□ 0
Col20a1Q923P0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.08■□□□□ 0
Col20a1Q923P0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.08■□□□□ 0
Col20a1Q923P0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Col20a1Q923P0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.07■□□□□ 0
Col20a1Q923P0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.07■□□□□ 0
Col20a1Q923P0 Mir433-201ENSMUST00000093564 124 ntBASIC15.07■□□□□ 0
Col20a1Q923P0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col20a1Q923P0 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.07■□□□□ 0
Col20a1Q923P0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col20a1Q923P0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms