Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha9Q91Y11 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Gm37008-201ENSMUST00000195712 319 ntBASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Gm5781-201ENSMUST00000219792 443 ntBASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha9Q91Y11 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdha9Q91Y11 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdha9Q91Y11 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdha9Q91Y11 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdha9Q91Y11 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.58□□□□□ -0.23
Pcdha9Q91Y11 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdha9Q91Y11 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm15703-201ENSMUST00000120250 880 ntBASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm24548-201ENSMUST00000158650 108 ntBASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm8738-201ENSMUST00000172606 329 ntBASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm19184-201ENSMUST00000196798 928 ntBASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdha9Q91Y11 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms