Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhga11Q91XY8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm8602-201ENSMUST00000184045 607 ntBASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga11Q91XY8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Gm12928-201ENSMUST00000117115 573 ntBASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.4□□□□□ -0.42
Pcdhga11Q91XY8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms