Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Gm1335-201ENSMUST00000121653 386 ntBASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Gm42627-201ENSMUST00000197347 224 ntBASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkd2Q8VE28 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gm38002-201ENSMUST00000193255 180 ntBASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gm16372-201ENSMUST00000073088 450 ntBASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkd2Q8VE28 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Gm26927-201ENSMUST00000182385 965 ntBASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Gm27682-201ENSMUST00000183930 110 ntBASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.68□□□□□ -0.54
Nkd2Q8VE28 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.68□□□□□ -0.54
Nkd2Q8VE28 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.68□□□□□ -0.54
Nkd2Q8VE28 Gm26315-201ENSMUST00000083890 321 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms