Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.09□□□□□ -0.31
CopaQ8CIE6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CopaQ8CIE6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CopaQ8CIE6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CopaQ8CIE6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm11618-201ENSMUST00000117946 267 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm19184-201ENSMUST00000196798 928 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm19309-201ENSMUST00000218295 205 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm7399-201ENSMUST00000032395 858 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Pck2-205ENSMUST00000226352 2784 ntBASIC13.08□□□□□ -0.32
CopaQ8CIE6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CopaQ8CIE6 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CopaQ8CIE6 Gm22018-201ENSMUST00000104357 131 ntBASIC13.07□□□□□ -0.32
CopaQ8CIE6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms