Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Gm6266-201ENSMUST00000203844 806 ntBASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.1□□□□□ -0.15
Trim9Q8C7M3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim9Q8C7M3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Gm40466-201ENSMUST00000212174 422 ntBASIC14.09□□□□□ -0.15
Trim9Q8C7M3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim9Q8C7M3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim9Q8C7M3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim9Q8C7M3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trim9Q8C7M3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trim9Q8C7M3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trim9Q8C7M3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim9Q8C7M3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Gm15703-201ENSMUST00000120250 880 ntBASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim9Q8C7M3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms