Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Gm45219-201ENSMUST00000205602 465 ntBASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Gm11628-201ENSMUST00000117568 171 ntBASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Gm13611-201ENSMUST00000118269 318 ntBASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Gm18893-201ENSMUST00000198416 943 ntBASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col6a6Q8C6K9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm17040-202ENSMUST00000170597 889 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm29615-201ENSMUST00000185371 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm28224-201ENSMUST00000186078 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm29001-201ENSMUST00000186177 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm28292-201ENSMUST00000186593 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm28101-201ENSMUST00000187608 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm29076-201ENSMUST00000187689 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm28302-201ENSMUST00000187931 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm28646-201ENSMUST00000188220 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm28205-201ENSMUST00000189177 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm29032-201ENSMUST00000189797 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm28695-201ENSMUST00000190300 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm37448-201ENSMUST00000192795 697 ntBASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col6a6Q8C6K9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms