Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm18584-201ENSMUST00000203098 964 ntBASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc60Q8C4J0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm12502-201ENSMUST00000120197 444 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm16379-201ENSMUST00000161469 348 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm8762-201ENSMUST00000193486 339 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm19184-201ENSMUST00000196798 928 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm17823-201ENSMUST00000217830 1006 ntBASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc60Q8C4J0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Gm12742-201ENSMUST00000117326 410 ntBASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Gm16296-201ENSMUST00000159905 325 ntBASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccdc60Q8C4J0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Gm6210-201ENSMUST00000204734 1942 ntBASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Gm8738-201ENSMUST00000172606 329 ntBASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.29■□□□□ 0.2
Ccdc60Q8C4J0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms