Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Gm13809-201ENSMUST00000117921 597 ntBASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Gm43184-201ENSMUST00000197247 542 ntBASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 CT571245.2-201ENSMUST00000218421 305 ntBASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 CT030637.1-201ENSMUST00000228016 669 ntBASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Gm26448-201ENSMUST00000082446 203 ntBASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col16a1Q8BLX7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm11892-201ENSMUST00000117711 1202 ntBASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm23153-201ENSMUST00000175323 313 ntBASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm8343-201ENSMUST00000182705 994 ntBASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm29155-201ENSMUST00000185910 269 ntBASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.46■□□□□ 0.23
Col16a1Q8BLX7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col16a1Q8BLX7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.46■□□□□ 0.22
Col16a1Q8BLX7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col16a1Q8BLX7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm8100-201ENSMUST00000182906 988 ntBASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm34023-201ENSMUST00000195539 217 ntBASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm18893-201ENSMUST00000198416 943 ntBASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm6905-201ENSMUST00000205729 511 ntBASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm9132-201ENSMUST00000210182 832 ntBASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 AC171241.1-201ENSMUST00000228144 1166 ntBASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Gm9072-201ENSMUST00000218390 1514 ntBASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col16a1Q8BLX7 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Gm22144-201ENSMUST00000157402 102 ntBASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms