Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc40Q8BI79 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gm28911-201ENSMUST00000188837 117 ntBASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc40Q8BI79 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc40Q8BI79 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ccdc40Q8BI79 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.27
Ccdc40Q8BI79 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ccdc40Q8BI79 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc40Q8BI79 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms