Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim6Q8BGE7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Gm27989-201ENSMUST00000184721 107 ntBASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim6Q8BGE7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Gm27838-201ENSMUST00000184829 128 ntBASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Gm26315-201ENSMUST00000083890 321 ntBASIC13.6□□□□□ -0.23
Trim6Q8BGE7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim6Q8BGE7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim6Q8BGE7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim6Q8BGE7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms