Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm22902-201ENSMUST00000158488 302 ntBASIC14.02□□□□□ -0.17
Ush1gQ80T11 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.02□□□□□ -0.17
Ush1gQ80T11 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.02□□□□□ -0.17
Ush1gQ80T11 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.02□□□□□ -0.17
Ush1gQ80T11 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.02□□□□□ -0.17
Ush1gQ80T11 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ush1gQ80T11 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ush1gQ80T11 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14□□□□□ -0.17
Ush1gQ80T11 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ush1gQ80T11 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14□□□□□ -0.17
Ush1gQ80T11 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ush1gQ80T11 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14□□□□□ -0.17
Ush1gQ80T11 Gm27341-201ENSMUST00000183570 106 ntBASIC14□□□□□ -0.17
Ush1gQ80T11 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ush1gQ80T11 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14□□□□□ -0.17
Ush1gQ80T11 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14□□□□□ -0.17
Ush1gQ80T11 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ush1gQ80T11 Gm9025-201ENSMUST00000122415 1575 ntBASIC14□□□□□ -0.17
Ush1gQ80T11 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14□□□□□ -0.17
Ush1gQ80T11 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ush1gQ80T11 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ush1gQ80T11 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms