Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.81□□□□□ -0.68
Rif1Q6PR54 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm24791-201ENSMUST00000104284 131 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm13182-201ENSMUST00000122241 312 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm10731-201ENSMUST00000181171 448 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm5599-201ENSMUST00000209602 788 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm5100-201ENSMUST00000195631 589 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rif1Q6PR54 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm32999-201ENSMUST00000192693 562 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm32025-201ENSMUST00000217960 307 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.79□□□□□ -0.68
Rif1Q6PR54 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
Rif1Q6PR54 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms