Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc85bQ6PDY0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Gm2445-201ENSMUST00000182798 989 ntBASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Rprl1-202ENSMUST00000198476 238 ntBASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc85bQ6PDY0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc85bQ6PDY0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc85bQ6PDY0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Gm12165-201ENSMUST00000117047 342 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Gm14460-201ENSMUST00000121511 639 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Gm28324-201ENSMUST00000187913 264 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Gm42790-201ENSMUST00000201268 969 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Gm25517-201ENSMUST00000083865 134 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Daam2-202ENSMUST00000224595 1926 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.33□□□□□ -0.28
Ccdc85bQ6PDY0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc85bQ6PDY0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms