Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Krt39Q6IFX4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Krt39Q6IFX4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Krt39Q6IFX4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Gm6745-201ENSMUST00000199216 526 ntBASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Krt39Q6IFX4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Gm44124-201ENSMUST00000204159 472 ntBASIC14.13□□□□□ -0.15
Krt39Q6IFX4 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.13□□□□□ -0.15
Krt39Q6IFX4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Gm6180-201ENSMUST00000065243 498 ntBASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Krt39Q6IFX4 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Gm6152-201ENSMUST00000151704 340 ntBASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Gm9794-201ENSMUST00000202370 423 ntBASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Krt39Q6IFX4 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Krt39Q6IFX4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms