Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ss18Q62280 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ss18Q62280 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Ss18Q62280 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ss18Q62280 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ss18Q62280 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ss18Q62280 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Ss18Q62280 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ss18Q62280 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ss18Q62280 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.46□□□□□ -0.89
Ss18Q62280 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ss18Q62280 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ss18Q62280 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Ss18Q62280 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Ss18Q62280 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.46□□□□□ -0.9
Ss18Q62280 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.46□□□□□ -0.9
Ss18Q62280 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Ss18Q62280 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.46□□□□□ -0.9
Ss18Q62280 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Syt7-204ENSMUST00000223586 1344 ntBASIC9.46□□□□□ -0.9
Ss18Q62280 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Ss18Q62280 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ss18Q62280 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.46□□□□□ -0.9
Ss18Q62280 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ss18Q62280 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ss18Q62280 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.45□□□□□ -0.9
Ss18Q62280 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.45□□□□□ -0.9
Ss18Q62280 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ss18Q62280 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC9.45□□□□□ -0.9
Ss18Q62280 Gm15376-201ENSMUST00000122258 783 ntBASIC9.45□□□□□ -0.9
Ss18Q62280 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Ss18Q62280 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.45□□□□□ -0.9
Ss18Q62280 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.45□□□□□ -0.9
Ss18Q62280 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.45□□□□□ -0.9
Ss18Q62280 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC9.45□□□□□ -0.9
Ss18Q62280 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC9.45□□□□□ -0.9
Ss18Q62280 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.45□□□□□ -0.9
Ss18Q62280 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.45□□□□□ -0.9
Ss18Q62280 Gm26315-201ENSMUST00000083890 321 ntBASIC9.45□□□□□ -0.9
Ss18Q62280 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Ss18Q62280 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ss18Q62280 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms