Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn9aQ62205 Gm44958-201ENSMUST00000203734 736 ntBASIC14.78□□□□□ -0.04
Scn9aQ62205 Gm9132-201ENSMUST00000210182 832 ntBASIC14.78□□□□□ -0.04
Scn9aQ62205 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn9aQ62205 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.78□□□□□ -0.04
Scn9aQ62205 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn9aQ62205 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn9aQ62205 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn9aQ62205 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn9aQ62205 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn9aQ62205 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Scn9aQ62205 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn9aQ62205 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn9aQ62205 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.77□□□□□ -0.04
Scn9aQ62205 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Scn9aQ62205 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn9aQ62205 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn9aQ62205 Gm24934-201ENSMUST00000103764 111 ntBASIC14.77□□□□□ -0.04
Scn9aQ62205 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Scn9aQ62205 Gm23771-201ENSMUST00000178702 110 ntBASIC14.77□□□□□ -0.04
Scn9aQ62205 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.77□□□□□ -0.04
Scn9aQ62205 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.77□□□□□ -0.04
Scn9aQ62205 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.77□□□□□ -0.04
Scn9aQ62205 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn9aQ62205 Gm10288-201ENSMUST00000084614 537 ntBASIC14.77□□□□□ -0.04
Scn9aQ62205 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.77□□□□□ -0.05
Scn9aQ62205 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn9aQ62205 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn9aQ62205 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.77□□□□□ -0.05
Scn9aQ62205 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Scn9aQ62205 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn9aQ62205 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm24231-201ENSMUST00000104315 133 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm4726-201ENSMUST00000135604 736 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm6019-201ENSMUST00000148369 736 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm20392-201ENSMUST00000173047 701 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm8343-201ENSMUST00000182705 994 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm28324-201ENSMUST00000187913 264 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm2965-201ENSMUST00000198365 343 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm4157-201ENSMUST00000211647 679 ntBASIC14.76□□□□□ -0.05
Scn9aQ62205 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.76□□□□□ -0.05
Scn9aQ62205 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scn9aQ62205 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn9aQ62205 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.75□□□□□ -0.05
Scn9aQ62205 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.75□□□□□ -0.05
Scn9aQ62205 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.75□□□□□ -0.05
Scn9aQ62205 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.75□□□□□ -0.05
Scn9aQ62205 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Scn9aQ62205 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.75□□□□□ -0.05
Scn9aQ62205 Gm26448-201ENSMUST00000082446 203 ntBASIC14.75□□□□□ -0.05
Scn9aQ62205 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Scn9aQ62205 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn9aQ62205 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms