Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 Gm13223-201ENSMUST00000118609 747 ntBASIC11.99□□□□□ -0.49
Sox17Q61473 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.99□□□□□ -0.49
Sox17Q61473 Gm24513-201ENSMUST00000174964 138 ntBASIC11.99□□□□□ -0.49
Sox17Q61473 Gm27397-201ENSMUST00000184997 107 ntBASIC11.99□□□□□ -0.49
Sox17Q61473 Gm44771-201ENSMUST00000206975 626 ntBASIC11.99□□□□□ -0.49
Sox17Q61473 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.99□□□□□ -0.49
Sox17Q61473 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.99□□□□□ -0.49
Sox17Q61473 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.99□□□□□ -0.49
Sox17Q61473 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sox17Q61473 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox17Q61473 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Sox17Q61473 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Sox17Q61473 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.98□□□□□ -0.49
Sox17Q61473 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Gm9522-201ENSMUST00000182394 926 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC11.98□□□□□ -0.49
Sox17Q61473 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.98□□□□□ -0.49
Sox17Q61473 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox17Q61473 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Gm9063-201ENSMUST00000223299 582 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.98□□□□□ -0.49
Sox17Q61473 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox17Q61473 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.98□□□□□ -0.49
Sox17Q61473 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sox17Q61473 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sox17Q61473 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.98□□□□□ -0.49
Sox17Q61473 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.97□□□□□ -0.49
Sox17Q61473 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sox17Q61473 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.97□□□□□ -0.49
Sox17Q61473 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sox17Q61473 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.97□□□□□ -0.49
Sox17Q61473 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.97□□□□□ -0.49
Sox17Q61473 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms