Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm7851-201ENSMUST00000117574 323 ntBASIC12.84□□□□□ -0.35
Fam196aQ3USH1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm18038-201ENSMUST00000197900 485 ntBASIC12.84□□□□□ -0.35
Fam196aQ3USH1 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm45398-201ENSMUST00000210561 165 ntBASIC12.84□□□□□ -0.35
Fam196aQ3USH1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Ginm1-202ENSMUST00000065124 300 ntBASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fam196aQ3USH1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.83□□□□□ -0.35
Fam196aQ3USH1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fam196aQ3USH1 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.83□□□□□ -0.35
Fam196aQ3USH1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fam196aQ3USH1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.83□□□□□ -0.35
Fam196aQ3USH1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Fam196aQ3USH1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Fam196aQ3USH1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Gm9230-201ENSMUST00000188228 532 ntBASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fam196aQ3USH1 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fam196aQ3USH1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms