Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm19931-201ENSMUST00000198920 368 ntBASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccbe1Q3MI99 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccbe1Q3MI99 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm27321-201ENSMUST00000185021 205 ntBASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm35960-201ENSMUST00000202712 767 ntBASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccbe1Q3MI99 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Gm13616-201ENSMUST00000120600 222 ntBASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccbe1Q3MI99 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms